Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921538.1_cds_XP_016470454.1_62900
CDS Infomation

[gene=LOC107792734] [db_xref=GeneID:107792734] [protein=monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic-like] [protein_id=XP_016470454.1] [location=complement(join(30172..30435,31721..32017,32105..32234,32442..32767,33165..33383,34200..34559))] [gbkey=CDS]
Sequence

ATGTCTGTTCCATTCATGGATTGTATCGTGTTTAAACATCCATCATTTCGAAGAATCTTT
ATCAGCTCAAATTGTTTTGGGACTTGTCAAAATATTGTTGGATTTGGGCAATACAGAAAA
AGAACAGTATTTACTACATGCTGTTCTACTGGAATTAACCCATTTGAAAGCAATCAGAAT
GGTTCTGTATTTGGTGGTTTGAATGATCAGAATTCTTCAGTTCCATTTGAAACATTGAGT
GCTGAAATAACACCAGAAACTATTGATTTCTTTGTGAGTGATGCTGAGGGTGATCCTGAT
TGTCCCACTAGCGGTTATTCTTCAATTGGGGAGGCACTTACTGCATTGCGTGAAGGAAAG
TTTGTGATTGTTGTAGATGATGAAAGTGGGGAAGTGGAAGGAAACCTTGTAATGGGAGCA
TCATTTGCTAGTGCAGAGGCAATTGCATTCATGGTAAGATATGGGTCAGGCATTATTTCT
GTGGGAATGAAAGAAGAGGATCTTGAAAGACTTGAGCTTCCTTTGATGTCACCTGAAAAA
GAAGATGACTCTTCTGCTCCATCCTTCACAATCACAGTGGATGCAAAGGTGGGCACATCT
ACTGGTGTATCGGCTTCAGATAGGGCTAAAACTGTGCTTGCATTGTCATCTCCTACTTCT
AGTCCTGAAGATTTTAGAAGGCCAGGCCACGTTTTCCCCCTCAAGTATCGAAATGGTGGG
GTCTTAAGAAGATTTGGTCATACTGAGGCTTCTGTTGATTTAGTCATGTCAGCCGGTTTG
CAACCTGTTTCTGTTCTTTCAGCTATAGTTGATAAAAATGATGGTTCAATAGCCACCAAG
CCCATTTTGGAGAATTTGGCCTTGGCGAACAAGATTCCTATTGTCTCAATGACTGATTTA
GTAAGATATAGGAGAAAGAGGGAAAATCTTGTCGAAAGAACTGCAGTGTCACGTTTACCA
ACTAAATGGGGATTATTTGAGGCTTACTGCTACCGTTCAAAGCTTGATGCAACTGAGCAT
ATAGCCGTTGTAAAGGGTGATATCGGGAATGGCCAAGATGTGTTGGTAAGGGTACACTCA
GAGTGTTTGACGGGGGACATATTTGGATCTAGACGATGTGATTGTGGTAATCAGCTGGAT
TTGGCAATGCAGTTGATTGAGGAAGCTGGTCGAGGTGTGGTTATCTATCTCAGAGGCCAC
GAAGGAAGAGGCATTGGCCTCGGTAACAAGCTTCAGGCTTATAACTTACAAGATCAAGGC
CATGACACTGTCGAAGCCAATTTGGAACTCGGCTTTGCTGCAGATGCTCGTGAATATGGC
ATTGGTGCACAGATGTTGAGGGATATAGGAGTTCGTACCATGCGCTTAATGACTAACAAT
CCAGCAAAATTTACCGGTCTAAAGGGATATGGTTTAGCTGTCGTTGGACGAGTACCAGTT
CTGACACCCTTCACAGAGGAAAACAGGAAGTATTTGGAAACAAAACGAACAAAAATGAGT
CATATATATGGATCTGATGTGCAGGGACCAATTAAGGCGTCCATCAATCGAAGTTTAAAG
AAACAAGATCCGCCCCAGGAAAGAAAAGAAAGTTGA

Peptide Sequence

PEP ID

XP_016470454.1
PEP Infomation

PREDICTED: monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MSVPFMDCIVFKHPSFRRIFISSNCFGTCQNIVGFGQYRKRTVFTTCCSTGINPFESNQN
GSVFGGLNDQNSSVPFETLSAEITPETIDFFVSDAEGDPDCPTSGYSSIGEALTALREGK
FVIVVDDESGEVEGNLVMGASFASAEAIAFMVRYGSGIISVGMKEEDLERLELPLMSPEK
EDDSSAPSFTITVDAKVGTSTGVSASDRAKTVLALSSPTSSPEDFRRPGHVFPLKYRNGG
VLRRFGHTEASVDLVMSAGLQPVSVLSAIVDKNDGSIATKPILENLALANKIPIVSMTDL
VRYRRKRENLVERTAVSRLPTKWGLFEAYCYRSKLDATEHIAVVKGDIGNGQDVLVRVHS
ECLTGDIFGSRRCDCGNQLDLAMQLIEEAGRGVVIYLRGHEGRGIGLGNKLQAYNLQDQG
HDTVEANLELGFAADAREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPV
LTPFTEENRKYLETKRTKMSHIYGSDVQGPIKASINRSLKKQDPPQERKES

Transcript Sequence

Gene sequence data has not been registered.